Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubfd1Q78JW9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm8584-201ENSMUST00000171982 758 ntBASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm45384-201ENSMUST00000210451 277 ntBASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ubfd1Q78JW9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm18307-201ENSMUST00000206864 949 ntBASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Mir497b-201ENSMUST00000093601 125 ntBASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ubfd1Q78JW9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubfd1Q78JW9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms