Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Gm13350-201ENSMUST00000120519 479 ntBASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Gm38266-201ENSMUST00000194931 421 ntBASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm29608-201ENSMUST00000190444 463 ntBASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm7783-201ENSMUST00000204795 781 ntBASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Snora73a-201ENSMUST00000082453 205 ntBASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm24526-201ENSMUST00000082921 158 ntBASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ddx55Q6ZPL9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gm18827-201ENSMUST00000188341 790 ntBASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms