Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm37917-201ENSMUST00000194711 392 ntBASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm6180-201ENSMUST00000065243 498 ntBASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm14928-201ENSMUST00000120198 477 ntBASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm5354-201ENSMUST00000182417 973 ntBASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm37714-201ENSMUST00000194742 342 ntBASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm7653-201ENSMUST00000214567 508 ntBASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Gm18027-201ENSMUST00000218947 619 ntBASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nudcd1Q6PIP5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Gm18624-201ENSMUST00000220966 658 ntBASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nudcd1Q6PIP5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nudcd1Q6PIP5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms