Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 BC001981-202ENSMUST00000191393 1545 ntBASIC14.2□□□□□ -0.14
Casc4Q6P2L7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Casc4Q6P2L7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm10576-201ENSMUST00000191927 825 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm44344-201ENSMUST00000200287 129 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gm46209-201ENSMUST00000217912 553 ntBASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Casc4Q6P2L7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm27680-201ENSMUST00000184192 160 ntBASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Gm44608-201ENSMUST00000206827 855 ntBASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Casc4Q6P2L7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Gm15957-201ENSMUST00000118893 974 ntBASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Casc4Q6P2L7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms