Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scn9aQ62205 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scn9aQ62205 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn9aQ62205 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.15■□□□□ 0.18
Scn9aQ62205 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm7809-201ENSMUST00000153199 742 ntBASIC16.15■□□□□ 0.18
Scn9aQ62205 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.15■□□□□ 0.18
Scn9aQ62205 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.15■□□□□ 0.18
Scn9aQ62205 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn9aQ62205 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn9aQ62205 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm16372-201ENSMUST00000073088 450 ntBASIC16.14■□□□□ 0.17
Scn9aQ62205 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn9aQ62205 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.14■□□□□ 0.17
Scn9aQ62205 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.13■□□□□ 0.17
Scn9aQ62205 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Scn9aQ62205 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm38144-201ENSMUST00000192790 465 ntBASIC16.13■□□□□ 0.17
Scn9aQ62205 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.13■□□□□ 0.17
Scn9aQ62205 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Scn9aQ62205 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Scn9aQ62205 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms