Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim27Q62158 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim27Q62158 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim27Q62158 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim27Q62158 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim27Q62158 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trim27Q62158 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim27Q62158 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.17■□□□□ 0.34
Trim27Q62158 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim27Q62158 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Gm15393-201ENSMUST00000120499 219 ntBASIC17.16■□□□□ 0.34
Trim27Q62158 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Gm10766-202ENSMUST00000194123 606 ntBASIC17.16■□□□□ 0.34
Trim27Q62158 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim27Q62158 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim27Q62158 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim27Q62158 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim27Q62158 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.15■□□□□ 0.34
Trim27Q62158 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim27Q62158 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim27Q62158 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.15■□□□□ 0.34
Trim27Q62158 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trim27Q62158 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim27Q62158 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.15■□□□□ 0.34
Trim27Q62158 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim27Q62158 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim27Q62158 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim27Q62158 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim27Q62158 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim27Q62158 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim27Q62158 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
Trim27Q62158 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim27Q62158 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.14■□□□□ 0.33
Trim27Q62158 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim27Q62158 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.13■□□□□ 0.33
Trim27Q62158 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim27Q62158 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms