Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.86□□□□□ -0.35
VcanQ62059 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VcanQ62059 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VcanQ62059 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VcanQ62059 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VcanQ62059 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.85□□□□□ -0.35
VcanQ62059 Gm13316-201ENSMUST00000140537 691 ntBASIC12.85□□□□□ -0.35
VcanQ62059 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 AA914427-201ENSMUST00000193194 1166 ntBASIC12.85□□□□□ -0.35
VcanQ62059 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.85□□□□□ -0.35
VcanQ62059 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.85□□□□□ -0.35
VcanQ62059 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VcanQ62059 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.85□□□□□ -0.35
VcanQ62059 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Gm7600-201ENSMUST00000209657 785 ntBASIC12.85□□□□□ -0.35
VcanQ62059 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.85□□□□□ -0.35
VcanQ62059 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VcanQ62059 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.85□□□□□ -0.35
VcanQ62059 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Gm3890-201ENSMUST00000182416 207 ntBASIC12.84□□□□□ -0.35
VcanQ62059 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.84□□□□□ -0.35
VcanQ62059 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VcanQ62059 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.84□□□□□ -0.35
VcanQ62059 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
VcanQ62059 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VcanQ62059 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
VcanQ62059 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VcanQ62059 Gm14726-201ENSMUST00000120623 896 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Gm27772-201ENSMUST00000184900 187 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Gm13097-201ENSMUST00000210722 397 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.84□□□□□ -0.35
VcanQ62059 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.84□□□□□ -0.35
VcanQ62059 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
VcanQ62059 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
VcanQ62059 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.84□□□□□ -0.35
VcanQ62059 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.84□□□□□ -0.35
VcanQ62059 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.84□□□□□ -0.35
VcanQ62059 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VcanQ62059 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VcanQ62059 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VcanQ62059 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VcanQ62059 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VcanQ62059 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
VcanQ62059 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
VcanQ62059 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.83□□□□□ -0.36
VcanQ62059 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VcanQ62059 Gm12029-201ENSMUST00000120073 832 ntBASIC12.83□□□□□ -0.36
VcanQ62059 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.83□□□□□ -0.36
VcanQ62059 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
VcanQ62059 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.83□□□□□ -0.36
VcanQ62059 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms