Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22065-201ENSMUST00000103753 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22066-201ENSMUST00000103761 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24932-201ENSMUST00000103763 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24115-201ENSMUST00000103799 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22190-201ENSMUST00000103827 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22191-201ENSMUST00000103831 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24721-201ENSMUST00000103849 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm28018-201ENSMUST00000103869 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm26399-201ENSMUST00000103937 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm26474-201ENSMUST00000116762 122 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm12134-201ENSMUST00000122109 520 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.41□□□□□ -0.74
Foxc1Q61572 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25349-201ENSMUST00000177728 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm23616-201ENSMUST00000177797 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25871-201ENSMUST00000177816 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24752-201ENSMUST00000178240 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24496-201ENSMUST00000178287 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25649-201ENSMUST00000178476 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25548-201ENSMUST00000178681 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm23147-201ENSMUST00000178841 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm26095-201ENSMUST00000179270 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22171-201ENSMUST00000179283 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm23936-201ENSMUST00000179354 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm22619-201ENSMUST00000179516 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25255-201ENSMUST00000179579 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24755-201ENSMUST00000179691 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm26506-201ENSMUST00000179692 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm25086-201ENSMUST00000179931 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm23243-201ENSMUST00000180047 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24659-201ENSMUST00000180212 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm24169-201ENSMUST00000180244 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm23689-201ENSMUST00000180354 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm27359-201ENSMUST00000184153 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm27785-201ENSMUST00000184268 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm27466-201ENSMUST00000184396 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm27703-201ENSMUST00000184836 110 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Foxc1Q61572 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.41□□□□□ -0.74
Foxc1Q61572 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Foxc1Q61572 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.4□□□□□ -0.74
Foxc1Q61572 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Foxc1Q61572 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Foxc1Q61572 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.4□□□□□ -0.74
Foxc1Q61572 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Foxc1Q61572 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Foxc1Q61572 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.4□□□□□ -0.74
Foxc1Q61572 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms