Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.51□□□□□ -0.25
Col12a1Q60847 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col12a1Q60847 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm8194-201ENSMUST00000159783 859 ntBASIC13.51□□□□□ -0.25
Col12a1Q60847 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm12363-201ENSMUST00000122250 668 ntBASIC13.51□□□□□ -0.25
Col12a1Q60847 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
Col12a1Q60847 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col12a1Q60847 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col12a1Q60847 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Mir497b-201ENSMUST00000093601 125 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm15276-201ENSMUST00000145953 498 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.5□□□□□ -0.25
Col12a1Q60847 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.5□□□□□ -0.25
Col12a1Q60847 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.5□□□□□ -0.25
Col12a1Q60847 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm13408-201ENSMUST00000119822 798 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm13935-201ENSMUST00000121859 798 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm9540-201ENSMUST00000188230 478 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm29741-201ENSMUST00000192667 421 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm45219-201ENSMUST00000205602 465 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.49□□□□□ -0.25
Col12a1Q60847 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm14665-201ENSMUST00000122294 557 ntBASIC13.49□□□□□ -0.25
Col12a1Q60847 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms