Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upf3aQ3ULJ3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Mir698-201ENSMUST00000102164 109 ntBASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upf3aQ3ULJ3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm42693-201ENSMUST00000196779 631 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm10478-201ENSMUST00000084451 396 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.66□□□□□ -0.06
Upf3aQ3ULJ3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Gm17420-201ENSMUST00000164753 153 ntBASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Upf3aQ3ULJ3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Upf3aQ3ULJ3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Upf3aQ3ULJ3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Upf3aQ3ULJ3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms