Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.14□□□□□ -0.47
Q3U1D9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.14□□□□□ -0.47
Q3U1D9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Q3U1D9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Q3U1D9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Q3U1D9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Q3U1D9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Q3U1D9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.13□□□□□ -0.47
Q3U1D9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Q3U1D9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.13□□□□□ -0.47
Q3U1D9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Q3U1D9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Q3U1D9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Q3U1D9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.13□□□□□ -0.47
Q3U1D9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q3U1D9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.12□□□□□ -0.47
Q3U1D9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.12□□□□□ -0.47
Q3U1D9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.12□□□□□ -0.47
Q3U1D9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.12□□□□□ -0.47
Q3U1D9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.12□□□□□ -0.47
Q3U1D9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Q3U1D9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q3U1D9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Q3U1D9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q3U1D9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q3U1D9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q3U1D9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms