Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Fndc4Q3TR08 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Fndc4Q3TR08 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gm9385-201ENSMUST00000117563 472 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gm17271-201ENSMUST00000165535 355 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Gm10175-201ENSMUST00000086013 645 ntBASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fndc4Q3TR08 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fndc4Q3TR08 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Fndc4Q3TR08 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms