Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12□□□□□ -0.49
Smn1P97801 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Gm13884-201ENSMUST00000118103 829 ntBASIC12□□□□□ -0.49
Smn1P97801 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Smn1P97801 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Smn1P97801 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Smn1P97801 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12□□□□□ -0.49
Smn1P97801 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smn1P97801 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smn1P97801 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12□□□□□ -0.49
Smn1P97801 Gm5763-201ENSMUST00000155951 1530 ntBASIC12□□□□□ -0.49
Smn1P97801 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smn1P97801 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Smn1P97801 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.99□□□□□ -0.49
Smn1P97801 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Mir5126-201ENSMUST00000175513 77 ntBASIC11.99□□□□□ -0.49
Smn1P97801 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smn1P97801 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.99□□□□□ -0.49
Smn1P97801 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smn1P97801 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smn1P97801 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smn1P97801 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smn1P97801 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.98□□□□□ -0.49
Smn1P97801 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.98□□□□□ -0.49
Smn1P97801 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.98□□□□□ -0.49
Smn1P97801 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms