Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Mir8109-201ENSMUST00000184375 117 ntBASIC17.43■□□□□ 0.38
Smarcc1P97496 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.43■□□□□ 0.38
Smarcc1P97496 Gm43822-201ENSMUST00000200285 476 ntBASIC17.43■□□□□ 0.38
Smarcc1P97496 Gm19309-201ENSMUST00000218295 205 ntBASIC17.43■□□□□ 0.38
Smarcc1P97496 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcc1P97496 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcc1P97496 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.42■□□□□ 0.38
Smarcc1P97496 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.42■□□□□ 0.38
Smarcc1P97496 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarcc1P97496 Gm38241-201ENSMUST00000192641 898 ntBASIC17.42■□□□□ 0.38
Smarcc1P97496 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarcc1P97496 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Smarcc1P97496 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.42■□□□□ 0.38
Smarcc1P97496 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcc1P97496 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc1P97496 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc1P97496 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Smarcc1P97496 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Smarcc1P97496 Gm27516-201ENSMUST00000184237 98 ntBASIC17.41■□□□□ 0.38
Smarcc1P97496 Gm18827-201ENSMUST00000188341 790 ntBASIC17.41■□□□□ 0.38
Smarcc1P97496 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarcc1P97496 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Gm38002-201ENSMUST00000193255 180 ntBASIC17.41■□□□□ 0.38
Smarcc1P97496 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.41■□□□□ 0.38
Smarcc1P97496 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Gm5161-201ENSMUST00000075243 853 ntBASIC17.41■□□□□ 0.38
Smarcc1P97496 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcc1P97496 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcc1P97496 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.4■□□□□ 0.38
Smarcc1P97496 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcc1P97496 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm8213-201ENSMUST00000118191 441 ntBASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm1335-201ENSMUST00000121653 386 ntBASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm10156-201ENSMUST00000122364 462 ntBASIC17.4■□□□□ 0.38
Smarcc1P97496 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.4■□□□□ 0.38
Smarcc1P97496 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm3961-201ENSMUST00000204425 994 ntBASIC17.4■□□□□ 0.38
Smarcc1P97496 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcc1P97496 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms