Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.9□□□□□ -0.34
Cacna1aP97445 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Gm12134-201ENSMUST00000122109 520 ntBASIC12.9□□□□□ -0.34
Cacna1aP97445 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.9□□□□□ -0.34
Cacna1aP97445 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.9□□□□□ -0.34
Cacna1aP97445 Gm43758-201ENSMUST00000199500 367 ntBASIC12.9□□□□□ -0.34
Cacna1aP97445 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.9□□□□□ -0.34
Cacna1aP97445 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cacna1aP97445 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.9□□□□□ -0.34
Cacna1aP97445 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Cacna1aP97445 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cacna1aP97445 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cacna1aP97445 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.9□□□□□ -0.35
Cacna1aP97445 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cacna1aP97445 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cacna1aP97445 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cacna1aP97445 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Cacna1aP97445 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cacna1aP97445 Gm14263-201ENSMUST00000117955 746 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm26083-201ENSMUST00000157904 193 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm4804-201ENSMUST00000182234 999 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Carlr-201ENSMUST00000181515 2574 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm44608-201ENSMUST00000206827 855 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Nsd1-205ENSMUST00000224693 852 ntBASIC12.89□□□□□ -0.35
Cacna1aP97445 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cacna1aP97445 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.89□□□□□ -0.35
Cacna1aP97445 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cacna1aP97445 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm21470-201ENSMUST00000187680 696 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm11803-201ENSMUST00000119966 444 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm44364-201ENSMUST00000198368 141 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms