Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.48■□□□□ 0.39
Nkx2-3P97334 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.48■□□□□ 0.39
Nkx2-3P97334 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-3P97334 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm27682-201ENSMUST00000183930 110 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm19309-201ENSMUST00000218295 205 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.47■□□□□ 0.39
Nkx2-3P97334 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nkx2-3P97334 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.46■□□□□ 0.39
Nkx2-3P97334 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.46■□□□□ 0.39
Nkx2-3P97334 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.46■□□□□ 0.39
Nkx2-3P97334 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-3P97334 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-3P97334 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-3P97334 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-3P97334 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-3P97334 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-3P97334 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Gm2445-201ENSMUST00000182798 989 ntBASIC17.45■□□□□ 0.38
Nkx2-3P97334 Gm43818-201ENSMUST00000200605 466 ntBASIC17.45■□□□□ 0.38
Nkx2-3P97334 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.45■□□□□ 0.38
Nkx2-3P97334 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.45■□□□□ 0.38
Nkx2-3P97334 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.45■□□□□ 0.38
Nkx2-3P97334 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-3P97334 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gm17330-201ENSMUST00000221047 165 ntBASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gm45930-201ENSMUST00000221330 292 ntBASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-3P97334 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms