Protein–RNA interactions for Protein: P70217

Hoxd13, Homeobox protein Hox-D13, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd13P70217 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd13P70217 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd13P70217 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxd13P70217 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.42□□□□□ -0.1
Hoxd13P70217 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gm15371-201ENSMUST00000117057 784 ntBASIC14.42□□□□□ -0.1
Hoxd13P70217 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxd13P70217 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.42□□□□□ -0.1
Hoxd13P70217 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.42□□□□□ -0.1
Hoxd13P70217 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm14660-201ENSMUST00000119809 575 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm27731-201ENSMUST00000185192 107 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm29649-201ENSMUST00000185649 419 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm29741-201ENSMUST00000192667 421 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm44397-201ENSMUST00000195950 113 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm38671-201ENSMUST00000200573 130 ntBASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxd13P70217 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxd13P70217 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Mir698-201ENSMUST00000102164 109 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 Gm38223-201ENSMUST00000194484 695 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Gm10012-201ENSMUST00000078252 192 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxd13P70217 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.4□□□□□ -0.1
Hoxd13P70217 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxd13P70217 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxd13P70217 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd13P70217 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd13P70217 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxd13P70217 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Hoxd13P70217 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms