Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Six5P70178 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.12□□□□□ -0.31
Six5P70178 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.12□□□□□ -0.31
Six5P70178 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.12□□□□□ -0.31
Six5P70178 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Six5P70178 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.12□□□□□ -0.31
Six5P70178 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Six5P70178 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.12□□□□□ -0.31
Six5P70178 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Six5P70178 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.11□□□□□ -0.31
Six5P70178 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.11□□□□□ -0.31
Six5P70178 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.11□□□□□ -0.31
Six5P70178 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.11□□□□□ -0.31
Six5P70178 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Mir6956-201ENSMUST00000183598 62 ntBASIC13.11□□□□□ -0.31
Six5P70178 Gm37714-201ENSMUST00000194742 342 ntBASIC13.11□□□□□ -0.31
Six5P70178 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Gm46209-201ENSMUST00000217912 553 ntBASIC13.11□□□□□ -0.31
Six5P70178 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.11□□□□□ -0.31
Six5P70178 Gm6888-201ENSMUST00000221983 706 ntBASIC13.11□□□□□ -0.31
Six5P70178 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Six5P70178 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.11□□□□□ -0.31
Six5P70178 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Six5P70178 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Six5P70178 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.11□□□□□ -0.31
Six5P70178 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Six5P70178 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six5P70178 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Six5P70178 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.1□□□□□ -0.31
Six5P70178 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Six5P70178 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.1□□□□□ -0.31
Six5P70178 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Six5P70178 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.1□□□□□ -0.31
Six5P70178 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.1□□□□□ -0.31
Six5P70178 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six5P70178 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms