Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.68□□□□□ -0.38
Vbp1P61759 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.68□□□□□ -0.38
Vbp1P61759 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Vbp1P61759 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vbp1P61759 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Olfr129-201ENSMUST00000122318 993 ntBASIC12.67□□□□□ -0.38
Vbp1P61759 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.67□□□□□ -0.38
Vbp1P61759 Gm18489-201ENSMUST00000172565 551 ntBASIC12.67□□□□□ -0.38
Vbp1P61759 Gm22240-201ENSMUST00000175225 82 ntBASIC12.67□□□□□ -0.38
Vbp1P61759 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vbp1P61759 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.67□□□□□ -0.38
Vbp1P61759 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.67□□□□□ -0.38
Vbp1P61759 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.67□□□□□ -0.38
Vbp1P61759 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vbp1P61759 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vbp1P61759 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Vbp1P61759 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.66□□□□□ -0.38
Vbp1P61759 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.66□□□□□ -0.38
Vbp1P61759 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Vbp1P61759 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Vbp1P61759 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vbp1P61759 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vbp1P61759 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vbp1P61759 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms