Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC19.22■□□□□ 0.67
Smg6P61406 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Smg6P61406 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Smg6P61406 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.22■□□□□ 0.67
Smg6P61406 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smg6P61406 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smg6P61406 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg6P61406 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg6P61406 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.21■□□□□ 0.67
Smg6P61406 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smg6P61406 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg6P61406 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg6P61406 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg6P61406 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.2■□□□□ 0.66
Smg6P61406 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.2■□□□□ 0.66
Smg6P61406 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.2■□□□□ 0.66
Smg6P61406 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg6P61406 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg6P61406 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Smg6P61406 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.19■□□□□ 0.66
Smg6P61406 Gm2445-201ENSMUST00000182798 989 ntBASIC19.19■□□□□ 0.66
Smg6P61406 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.19■□□□□ 0.66
Smg6P61406 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.19■□□□□ 0.66
Smg6P61406 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smg6P61406 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smg6P61406 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smg6P61406 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.19■□□□□ 0.66
Smg6P61406 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC19.19■□□□□ 0.66
Smg6P61406 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smg6P61406 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg6P61406 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Smg6P61406 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Gm21854-201ENSMUST00000179901 471 ntBASIC19.18■□□□□ 0.66
Smg6P61406 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.18■□□□□ 0.66
Smg6P61406 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smg6P61406 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smg6P61406 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg6P61406 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smg6P61406 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.17■□□□□ 0.66
Smg6P61406 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smg6P61406 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smg6P61406 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smg6P61406 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.17■□□□□ 0.66
Smg6P61406 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smg6P61406 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg6P61406 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg6P61406 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms