Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm4271-201ENSMUST00000174444 973 ntBASIC18.77■□□□□ 0.6
Nphp4P59240 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.77■□□□□ 0.6
Nphp4P59240 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.77■□□□□ 0.6
Nphp4P59240 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nphp4P59240 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Nphp4P59240 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nphp4P59240 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Nphp4P59240 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nphp4P59240 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
Nphp4P59240 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.77■□□□□ 0.59
Nphp4P59240 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nphp4P59240 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.77■□□□□ 0.59
Nphp4P59240 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.76■□□□□ 0.59
Nphp4P59240 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Nphp4P59240 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.76■□□□□ 0.59
Nphp4P59240 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC18.76■□□□□ 0.59
Nphp4P59240 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nphp4P59240 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Gm29705-201ENSMUST00000212598 474 ntBASIC18.76■□□□□ 0.59
Nphp4P59240 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.76■□□□□ 0.59
Nphp4P59240 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nphp4P59240 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.76■□□□□ 0.59
Nphp4P59240 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nphp4P59240 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp4P59240 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nphp4P59240 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nphp4P59240 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.75■□□□□ 0.59
Nphp4P59240 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Nphp4P59240 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.75■□□□□ 0.59
Nphp4P59240 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nphp4P59240 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nphp4P59240 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.75■□□□□ 0.59
Nphp4P59240 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp4P59240 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.74■□□□□ 0.59
Nphp4P59240 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.74■□□□□ 0.59
Nphp4P59240 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.74■□□□□ 0.59
Nphp4P59240 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Nphp4P59240 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nphp4P59240 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.74■□□□□ 0.59
Nphp4P59240 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Gm12742-201ENSMUST00000117326 410 ntBASIC18.74■□□□□ 0.59
Nphp4P59240 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.74■□□□□ 0.59
Nphp4P59240 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.74■□□□□ 0.59
Nphp4P59240 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.74■□□□□ 0.59
Nphp4P59240 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC18.74■□□□□ 0.59
Nphp4P59240 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nphp4P59240 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nphp4P59240 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC18.73■□□□□ 0.59
Nphp4P59240 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.73■□□□□ 0.59
Nphp4P59240 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nphp4P59240 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms