Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nup43P59235 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.23□□□□□ -0.29
Nup43P59235 Gm12585-201ENSMUST00000117307 290 ntBASIC13.23□□□□□ -0.29
Nup43P59235 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Mir8102-201ENSMUST00000184148 139 ntBASIC13.23□□□□□ -0.29
Nup43P59235 Gm21470-201ENSMUST00000187680 696 ntBASIC13.23□□□□□ -0.29
Nup43P59235 Gm10576-201ENSMUST00000191927 825 ntBASIC13.23□□□□□ -0.29
Nup43P59235 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.23□□□□□ -0.29
Nup43P59235 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nup43P59235 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nup43P59235 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Nup43P59235 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.22□□□□□ -0.29
Nup43P59235 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Gm4875-201ENSMUST00000118257 786 ntBASIC13.22□□□□□ -0.29
Nup43P59235 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.22□□□□□ -0.29
Nup43P59235 Auts2-212ENSMUST00000178555 309 ntBASIC13.22□□□□□ -0.29
Nup43P59235 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.22□□□□□ -0.29
Nup43P59235 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.22□□□□□ -0.29
Nup43P59235 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup43P59235 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup43P59235 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Nup43P59235 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.21□□□□□ -0.29
Nup43P59235 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Nup43P59235 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.21□□□□□ -0.29
Nup43P59235 Mir7684-201ENSMUST00000183858 60 ntBASIC13.21□□□□□ -0.29
Nup43P59235 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nup43P59235 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.21□□□□□ -0.29
Nup43P59235 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup43P59235 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup43P59235 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nup43P59235 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup43P59235 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.21□□□□□ -0.3
Nup43P59235 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup43P59235 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup43P59235 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup43P59235 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nup43P59235 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms