Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Gm27300-201ENSMUST00000184085 97 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Gm27335-201ENSMUST00000184758 97 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tpm1P58771 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tpm1P58771 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Tpm1P58771 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Tpm1P58771 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tpm1P58771 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Tpm1P58771 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.61■□□□□ 0.09
Tpm1P58771 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Tpm1P58771 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Tpm1P58771 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tpm1P58771 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Tpm1P58771 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.6■□□□□ 0.09
Tpm1P58771 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Tpm1P58771 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.6■□□□□ 0.09
Tpm1P58771 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.6■□□□□ 0.09
Tpm1P58771 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.6■□□□□ 0.09
Tpm1P58771 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.6■□□□□ 0.09
Tpm1P58771 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tpm1P58771 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tpm1P58771 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tpm1P58771 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.59■□□□□ 0.09
Tpm1P58771 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tpm1P58771 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms