Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Strn4P58404 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.57■□□□□ 0.4
Strn4P58404 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Strn4P58404 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Strn4P58404 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Strn4P58404 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Strn4P58404 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Strn4P58404 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.56■□□□□ 0.4
Strn4P58404 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Gm13226-201ENSMUST00000117838 404 ntBASIC17.56■□□□□ 0.4
Strn4P58404 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.56■□□□□ 0.4
Strn4P58404 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.56■□□□□ 0.4
Strn4P58404 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.56■□□□□ 0.4
Strn4P58404 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.56■□□□□ 0.4
Strn4P58404 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.56■□□□□ 0.4
Strn4P58404 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Strn4P58404 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Strn4P58404 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Strn4P58404 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Strn4P58404 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.55■□□□□ 0.4
Strn4P58404 Gm8062-201ENSMUST00000139696 444 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.55■□□□□ 0.4
Strn4P58404 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.55■□□□□ 0.4
Strn4P58404 Gm19078-201ENSMUST00000206311 727 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Gm45331-201ENSMUST00000209868 554 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Gm5425-201ENSMUST00000214125 459 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.55■□□□□ 0.4
Strn4P58404 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Strn4P58404 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Strn4P58404 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Strn4P58404 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Strn4P58404 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Strn4P58404 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Gm12928-201ENSMUST00000117115 573 ntBASIC17.54■□□□□ 0.4
Strn4P58404 Gm13392-201ENSMUST00000117708 150 ntBASIC17.54■□□□□ 0.4
Strn4P58404 Gm13689-201ENSMUST00000119360 685 ntBASIC17.54■□□□□ 0.4
Strn4P58404 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Strn4P58404 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.54■□□□□ 0.4
Strn4P58404 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Strn4P58404 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.54■□□□□ 0.4
Strn4P58404 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms