Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.06□□□□□ -0.16
SmoP56726 Gm5354-201ENSMUST00000182417 973 ntBASIC14.06□□□□□ -0.16
SmoP56726 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.06□□□□□ -0.16
SmoP56726 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.06□□□□□ -0.16
SmoP56726 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.06□□□□□ -0.16
SmoP56726 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SmoP56726 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SmoP56726 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Gm14928-201ENSMUST00000120198 477 ntBASIC14.05□□□□□ -0.16
SmoP56726 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.05□□□□□ -0.16
SmoP56726 Gm24420-201ENSMUST00000176676 59 ntBASIC14.05□□□□□ -0.16
SmoP56726 Gm37917-201ENSMUST00000194711 392 ntBASIC14.05□□□□□ -0.16
SmoP56726 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.05□□□□□ -0.16
SmoP56726 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Gm45668-201ENSMUST00000211271 493 ntBASIC14.05□□□□□ -0.16
SmoP56726 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.05□□□□□ -0.16
SmoP56726 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.05□□□□□ -0.16
SmoP56726 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SmoP56726 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SmoP56726 Mir698-201ENSMUST00000102164 109 ntBASIC14.04□□□□□ -0.16
SmoP56726 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.04□□□□□ -0.16
SmoP56726 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.04□□□□□ -0.16
SmoP56726 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SmoP56726 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.04□□□□□ -0.16
SmoP56726 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.04□□□□□ -0.16
SmoP56726 Gm19220-201ENSMUST00000222682 803 ntBASIC14.04□□□□□ -0.16
SmoP56726 Gm15823-201ENSMUST00000064305 670 ntBASIC14.04□□□□□ -0.16
SmoP56726 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SmoP56726 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SmoP56726 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SmoP56726 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
SmoP56726 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.03□□□□□ -0.16
SmoP56726 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms