Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Sox1P53783 Gm25890-201ENSMUST00000177643 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm22614-201ENSMUST00000178300 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox1P53783 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Gm22042-201ENSMUST00000082989 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm26232-201ENSMUST00000083360 166 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm24136-201ENSMUST00000083374 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm26110-201ENSMUST00000083971 165 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox1P53783 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox1P53783 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
Sox1P53783 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Sox1P53783 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox1P53783 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.2□□□□□ -0.14
Sox1P53783 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gm20426-201ENSMUST00000173657 440 ntBASIC14.2□□□□□ -0.14
Sox1P53783 Gm6407-201ENSMUST00000176468 549 ntBASIC14.2□□□□□ -0.14
Sox1P53783 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox1P53783 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gm45118-201ENSMUST00000208928 825 ntBASIC14.2□□□□□ -0.14
Sox1P53783 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox1P53783 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.2□□□□□ -0.14
Sox1P53783 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox1P53783 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox1P53783 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm7857-201ENSMUST00000117957 358 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Gm16379-201ENSMUST00000161469 348 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox1P53783 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox1P53783 Gm8927-201ENSMUST00000181978 981 ntBASIC14.19□□□□□ -0.14
Sox1P53783 Gm3508-201ENSMUST00000186012 792 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms