Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox18P43680 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox18P43680 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox18P43680 Gm21470-201ENSMUST00000187680 696 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Gm19080-201ENSMUST00000196082 550 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Olfr286-202ENSMUST00000205305 969 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.44□□□□□ -0.26
Sox18P43680 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox18P43680 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox18P43680 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox18P43680 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sox18P43680 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Sox18P43680 Gm13350-201ENSMUST00000120519 479 ntBASIC13.43□□□□□ -0.26
Sox18P43680 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox18P43680 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox18P43680 Gm24196-201ENSMUST00000179161 110 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.43□□□□□ -0.26
Sox18P43680 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Gm38216-201ENSMUST00000194872 1214 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox18P43680 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox18P43680 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.43□□□□□ -0.26
Sox18P43680 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox18P43680 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.42□□□□□ -0.26
Sox18P43680 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox18P43680 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox18P43680 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox18P43680 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox18P43680 Gm7584-201ENSMUST00000175829 940 ntBASIC13.42□□□□□ -0.26
Sox18P43680 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox18P43680 Gm29199-201ENSMUST00000187766 775 ntBASIC13.42□□□□□ -0.26
Sox18P43680 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox18P43680 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.42□□□□□ -0.26
Sox18P43680 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms