Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gdf6P43028 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.67□□□□□ -0.06
Gdf6P43028 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Gm26464-201ENSMUST00000157094 305 ntBASIC14.67□□□□□ -0.06
Gdf6P43028 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.67□□□□□ -0.06
Gdf6P43028 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.67□□□□□ -0.06
Gdf6P43028 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.67□□□□□ -0.06
Gdf6P43028 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Gdf6P43028 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gdf6P43028 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.67□□□□□ -0.06
Gdf6P43028 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gdf6P43028 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Gdf6P43028 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.66□□□□□ -0.06
Gdf6P43028 Gm9002-201ENSMUST00000178437 499 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Gm27772-201ENSMUST00000184900 187 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.66□□□□□ -0.06
Gdf6P43028 Gm43433-201ENSMUST00000196573 481 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
Gdf6P43028 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.66□□□□□ -0.06
Gdf6P43028 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.66□□□□□ -0.06
Gdf6P43028 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gdf6P43028 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.66□□□□□ -0.06
Gdf6P43028 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Gdf6P43028 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.65□□□□□ -0.06
Gdf6P43028 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Gdf6P43028 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.65□□□□□ -0.06
Gdf6P43028 Gm5035-201ENSMUST00000215581 927 ntBASIC14.65□□□□□ -0.06
Gdf6P43028 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Gdf6P43028 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Gdf6P43028 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gdf6P43028 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms