Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
HttP42859 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HttP42859 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HttP42859 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.54□□□□□ -0.08
HttP42859 Gm37042-201ENSMUST00000193816 581 ntBASIC14.54□□□□□ -0.08
HttP42859 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.54□□□□□ -0.08
HttP42859 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.54□□□□□ -0.08
HttP42859 Gm23270-201ENSMUST00000104055 131 ntBASIC14.54□□□□□ -0.08
HttP42859 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.54□□□□□ -0.08
HttP42859 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Gm9211-201ENSMUST00000182882 975 ntBASIC14.54□□□□□ -0.08
HttP42859 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HttP42859 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.54□□□□□ -0.08
HttP42859 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HttP42859 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.53□□□□□ -0.08
HttP42859 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HttP42859 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Gm37905-201ENSMUST00000195310 341 ntBASIC14.53□□□□□ -0.08
HttP42859 Gm9555-201ENSMUST00000200908 583 ntBASIC14.53□□□□□ -0.08
HttP42859 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HttP42859 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.53□□□□□ -0.08
HttP42859 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HttP42859 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.52□□□□□ -0.08
HttP42859 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.52□□□□□ -0.08
HttP42859 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.52□□□□□ -0.08
HttP42859 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HttP42859 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
HttP42859 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.52□□□□□ -0.09
HttP42859 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HttP42859 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.52□□□□□ -0.09
HttP42859 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HttP42859 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.52□□□□□ -0.09
HttP42859 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HttP42859 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.52□□□□□ -0.09
HttP42859 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms