Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.74□□□□□ -0.53
Hmx3P42581 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Gm11764-201ENSMUST00000120221 623 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
Hmx3P42581 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Hmx3P42581 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 AV026068-213ENSMUST00000223675 1171 ntBASIC11.73□□□□□ -0.53
Hmx3P42581 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
Hmx3P42581 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmx3P42581 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmx3P42581 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Hmx3P42581 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.72□□□□□ -0.53
Hmx3P42581 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Gm4899-201ENSMUST00000178708 719 ntBASIC11.72□□□□□ -0.53
Hmx3P42581 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.72□□□□□ -0.53
Hmx3P42581 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hmx3P42581 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmx3P42581 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmx3P42581 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmx3P42581 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmx3P42581 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmx3P42581 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.71□□□□□ -0.53
Hmx3P42581 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmx3P42581 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hmx3P42581 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms