Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Gm24543-201ENSMUST00000103867 82 ntBASIC13.13□□□□□ -0.31
RetP35546 Gm11478-201ENSMUST00000117851 599 ntBASIC13.13□□□□□ -0.31
RetP35546 Gm15321-201ENSMUST00000121290 288 ntBASIC13.13□□□□□ -0.31
RetP35546 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.13□□□□□ -0.31
RetP35546 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.13□□□□□ -0.31
RetP35546 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.13□□□□□ -0.31
RetP35546 Gm8515-201ENSMUST00000194852 576 ntBASIC13.13□□□□□ -0.31
RetP35546 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RetP35546 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.13□□□□□ -0.31
RetP35546 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
RetP35546 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RetP35546 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RetP35546 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RetP35546 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.12□□□□□ -0.31
RetP35546 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.12□□□□□ -0.31
RetP35546 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Gm6912-201ENSMUST00000117218 544 ntBASIC13.12□□□□□ -0.31
RetP35546 Gm10275-202ENSMUST00000168697 495 ntBASIC13.12□□□□□ -0.31
RetP35546 Gm6745-201ENSMUST00000199216 526 ntBASIC13.12□□□□□ -0.31
RetP35546 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Gm6218-201ENSMUST00000219812 628 ntBASIC13.12□□□□□ -0.31
RetP35546 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.12□□□□□ -0.31
RetP35546 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.12□□□□□ -0.31
RetP35546 Gm10275-201ENSMUST00000092620 635 ntBASIC13.12□□□□□ -0.31
RetP35546 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RetP35546 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
RetP35546 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.12□□□□□ -0.31
RetP35546 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RetP35546 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
RetP35546 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
RetP35546 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RetP35546 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.11□□□□□ -0.31
RetP35546 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.11□□□□□ -0.31
RetP35546 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms