Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp13P33435 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Gm2810-201ENSMUST00000118681 990 ntBASIC14.33□□□□□ -0.12
Mmp13P33435 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Gm10253-201ENSMUST00000194270 940 ntBASIC14.33□□□□□ -0.12
Mmp13P33435 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Mmp13P33435 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.33□□□□□ -0.12
Mmp13P33435 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Mmp13P33435 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.33□□□□□ -0.12
Mmp13P33435 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Mmp13P33435 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Mmp13P33435 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp13P33435 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Mmp13P33435 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Mmp13P33435 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Mmp13P33435 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.32□□□□□ -0.12
Mmp13P33435 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.32□□□□□ -0.12
Mmp13P33435 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.32□□□□□ -0.12
Mmp13P33435 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp13P33435 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.32□□□□□ -0.12
Mmp13P33435 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.32□□□□□ -0.12
Mmp13P33435 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.32□□□□□ -0.12
Mmp13P33435 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp13P33435 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.31□□□□□ -0.12
Mmp13P33435 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mmp13P33435 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.31□□□□□ -0.12
Mmp13P33435 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp13P33435 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.31□□□□□ -0.12
Mmp13P33435 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.31□□□□□ -0.12
Mmp13P33435 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.31□□□□□ -0.12
Mmp13P33435 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Mmp13P33435 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.31□□□□□ -0.12
Mmp13P33435 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mmp13P33435 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.31□□□□□ -0.12
Mmp13P33435 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp13P33435 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp13P33435 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms