Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nedd8P29595 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nedd8P29595 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd8P29595 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.91□□□□□ -0.34
Nedd8P29595 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Nedd8P29595 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd8P29595 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.91□□□□□ -0.34
Nedd8P29595 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.91□□□□□ -0.34
Nedd8P29595 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nedd8P29595 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd8P29595 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd8P29595 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.9□□□□□ -0.34
Nedd8P29595 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Gm17808-201ENSMUST00000200859 894 ntBASIC12.9□□□□□ -0.34
Nedd8P29595 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Gm6296-201ENSMUST00000222599 943 ntBASIC12.9□□□□□ -0.34
Nedd8P29595 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nedd8P29595 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
Nedd8P29595 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nedd8P29595 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd8P29595 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Nedd8P29595 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Nedd8P29595 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nedd8P29595 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.89□□□□□ -0.35
Nedd8P29595 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.89□□□□□ -0.35
Nedd8P29595 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Nedd8P29595 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.89□□□□□ -0.35
Nedd8P29595 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nedd8P29595 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.89□□□□□ -0.35
Nedd8P29595 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nedd8P29595 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nedd8P29595 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.88□□□□□ -0.35
Nedd8P29595 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nedd8P29595 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms