Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Col8a2P25318 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col8a2P25318 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col8a2P25318 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm12585-201ENSMUST00000117307 290 ntBASIC11.68□□□□□ -0.54
Col8a2P25318 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.68□□□□□ -0.54
Col8a2P25318 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.68□□□□□ -0.54
Col8a2P25318 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.68□□□□□ -0.54
Col8a2P25318 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.68□□□□□ -0.54
Col8a2P25318 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col8a2P25318 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.68□□□□□ -0.54
Col8a2P25318 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col8a2P25318 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col8a2P25318 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col8a2P25318 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col8a2P25318 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.67□□□□□ -0.54
Col8a2P25318 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.67□□□□□ -0.54
Col8a2P25318 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.67□□□□□ -0.54
Col8a2P25318 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col8a2P25318 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Gm6180-201ENSMUST00000065243 498 ntBASIC11.67□□□□□ -0.54
Col8a2P25318 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.67□□□□□ -0.54
Col8a2P25318 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Col8a2P25318 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.67□□□□□ -0.54
Col8a2P25318 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.67□□□□□ -0.54
Col8a2P25318 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Col8a2P25318 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Col8a2P25318 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col8a2P25318 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col8a2P25318 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col8a2P25318 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms