Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BdnfP21237 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
BdnfP21237 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BdnfP21237 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BdnfP21237 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
BdnfP21237 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BdnfP21237 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.43□□□□□ -0.26
BdnfP21237 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.43□□□□□ -0.26
BdnfP21237 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
BdnfP21237 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
BdnfP21237 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
BdnfP21237 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
BdnfP21237 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.43□□□□□ -0.26
BdnfP21237 Mir8117-201ENSMUST00000184773 107 ntBASIC13.43□□□□□ -0.26
BdnfP21237 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.43□□□□□ -0.26
BdnfP21237 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BdnfP21237 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.42□□□□□ -0.26
BdnfP21237 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gm17271-201ENSMUST00000165535 355 ntBASIC13.42□□□□□ -0.26
BdnfP21237 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.42□□□□□ -0.26
BdnfP21237 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.42□□□□□ -0.26
BdnfP21237 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
BdnfP21237 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
BdnfP21237 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.42□□□□□ -0.26
BdnfP21237 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.42□□□□□ -0.26
BdnfP21237 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BdnfP21237 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.42□□□□□ -0.26
BdnfP21237 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
BdnfP21237 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.41□□□□□ -0.26
BdnfP21237 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
BdnfP21237 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
BdnfP21237 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
BdnfP21237 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Gm6973-201ENSMUST00000117080 721 ntBASIC13.41□□□□□ -0.26
BdnfP21237 Gm11779-201ENSMUST00000118541 368 ntBASIC13.41□□□□□ -0.26
BdnfP21237 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
BdnfP21237 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
BdnfP21237 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms