Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
VimP20152 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VimP20152 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VimP20152 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.19□□□□□ -0.14
VimP20152 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.19□□□□□ -0.14
VimP20152 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.19□□□□□ -0.14
VimP20152 Gm6433-201ENSMUST00000118634 875 ntBASIC14.19□□□□□ -0.14
VimP20152 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.19□□□□□ -0.14
VimP20152 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.19□□□□□ -0.14
VimP20152 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.19□□□□□ -0.14
VimP20152 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.19□□□□□ -0.14
VimP20152 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VimP20152 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VimP20152 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.19□□□□□ -0.14
VimP20152 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VimP20152 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.19□□□□□ -0.14
VimP20152 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VimP20152 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VimP20152 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
VimP20152 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.18□□□□□ -0.14
VimP20152 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VimP20152 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.18□□□□□ -0.14
VimP20152 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.18□□□□□ -0.14
VimP20152 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VimP20152 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.18□□□□□ -0.14
VimP20152 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VimP20152 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.18□□□□□ -0.14
VimP20152 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.17□□□□□ -0.14
VimP20152 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VimP20152 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Gm9682-201ENSMUST00000197505 556 ntBASIC14.17□□□□□ -0.14
VimP20152 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VimP20152 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VimP20152 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VimP20152 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms