Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cxcl1P12850 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Cxcl1P12850 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl1P12850 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cxcl1P12850 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm6973-201ENSMUST00000117080 721 ntBASIC11.58□□□□□ -0.56
Cxcl1P12850 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm11543-201ENSMUST00000120758 370 ntBASIC11.58□□□□□ -0.56
Cxcl1P12850 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.58□□□□□ -0.56
Cxcl1P12850 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.58□□□□□ -0.56
Cxcl1P12850 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.58□□□□□ -0.56
Cxcl1P12850 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.58□□□□□ -0.56
Cxcl1P12850 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.58□□□□□ -0.56
Cxcl1P12850 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl1P12850 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cxcl1P12850 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.57□□□□□ -0.56
Cxcl1P12850 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.57□□□□□ -0.56
Cxcl1P12850 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.57□□□□□ -0.56
Cxcl1P12850 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl1P12850 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl1P12850 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Cxcl1P12850 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl1P12850 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms