Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccl3P10855 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl3P10855 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl3P10855 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccl3P10855 Gm8598-201ENSMUST00000221184 836 ntBASIC12.31□□□□□ -0.44
Ccl3P10855 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Gm5161-201ENSMUST00000075243 853 ntBASIC12.31□□□□□ -0.44
Ccl3P10855 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccl3P10855 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccl3P10855 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ccl3P10855 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccl3P10855 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccl3P10855 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.3□□□□□ -0.44
Ccl3P10855 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccl3P10855 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccl3P10855 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccl3P10855 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl3P10855 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccl3P10855 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl3P10855 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm23931-201ENSMUST00000103842 109 ntBASIC12.29□□□□□ -0.44
Ccl3P10855 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm5187-201ENSMUST00000117317 991 ntBASIC12.29□□□□□ -0.44
Ccl3P10855 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccl3P10855 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm6152-201ENSMUST00000151704 340 ntBASIC12.29□□□□□ -0.44
Ccl3P10855 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm8810-201ENSMUST00000172895 754 ntBASIC12.29□□□□□ -0.44
Ccl3P10855 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccl3P10855 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.29□□□□□ -0.44
Ccl3P10855 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl3P10855 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl3P10855 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl3P10855 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl3P10855 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl3P10855 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl3P10855 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms