Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxd4P10628 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxd4P10628 AW822252-206ENSMUST00000208904 237 ntBASIC12.52□□□□□ -0.41
Hoxd4P10628 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxd4P10628 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.52□□□□□ -0.41
Hoxd4P10628 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxd4P10628 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.52□□□□□ -0.41
Hoxd4P10628 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.52□□□□□ -0.41
Hoxd4P10628 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxd4P10628 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.51□□□□□ -0.41
Hoxd4P10628 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Paupar-201ENSMUST00000194826 3482 ntBASIC12.51□□□□□ -0.41
Hoxd4P10628 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxd4P10628 Gm13464-201ENSMUST00000119418 935 ntBASIC12.51□□□□□ -0.41
Hoxd4P10628 Gm7862-201ENSMUST00000121461 292 ntBASIC12.51□□□□□ -0.41
Hoxd4P10628 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.51□□□□□ -0.41
Hoxd4P10628 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxd4P10628 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxd4P10628 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxd4P10628 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxd4P10628 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.5□□□□□ -0.41
Hoxd4P10628 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxd4P10628 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.5□□□□□ -0.41
Hoxd4P10628 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.5□□□□□ -0.41
Hoxd4P10628 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.5□□□□□ -0.41
Hoxd4P10628 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxd4P10628 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxd4P10628 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxd4P10628 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxd4P10628 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.49□□□□□ -0.41
Hoxd4P10628 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.49□□□□□ -0.41
Hoxd4P10628 Gm4459-201ENSMUST00000118750 468 ntBASIC12.49□□□□□ -0.41
Hoxd4P10628 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxd4P10628 Gm27867-201ENSMUST00000184778 125 ntBASIC12.49□□□□□ -0.41
Hoxd4P10628 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.49□□□□□ -0.41
Hoxd4P10628 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxd4P10628 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxd4P10628 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxd4P10628 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxd4P10628 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms