Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UbbP0CG49 Mir5131-201ENSMUST00000175426 93 ntBASIC12.18□□□□□ -0.46
UbbP0CG49 Gm17971-201ENSMUST00000190239 806 ntBASIC12.18□□□□□ -0.46
UbbP0CG49 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UbbP0CG49 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UbbP0CG49 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.18□□□□□ -0.46
UbbP0CG49 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UbbP0CG49 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UbbP0CG49 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.18□□□□□ -0.46
UbbP0CG49 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.18□□□□□ -0.46
UbbP0CG49 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UbbP0CG49 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.17□□□□□ -0.46
UbbP0CG49 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.17□□□□□ -0.46
UbbP0CG49 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.17□□□□□ -0.46
UbbP0CG49 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UbbP0CG49 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UbbP0CG49 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.17□□□□□ -0.46
UbbP0CG49 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.16□□□□□ -0.46
UbbP0CG49 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.16□□□□□ -0.46
UbbP0CG49 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.16□□□□□ -0.46
UbbP0CG49 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
UbbP0CG49 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.16□□□□□ -0.46
UbbP0CG49 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UbbP0CG49 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.16□□□□□ -0.46
UbbP0CG49 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.16□□□□□ -0.46
UbbP0CG49 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Gm12882-201ENSMUST00000121696 517 ntBASIC12.16□□□□□ -0.46
UbbP0CG49 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.16□□□□□ -0.46
UbbP0CG49 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.16□□□□□ -0.46
UbbP0CG49 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.16□□□□□ -0.46
UbbP0CG49 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.16□□□□□ -0.46
UbbP0CG49 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UbbP0CG49 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms