Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.06□□□□□ -0.32
Sod1P08228 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.06□□□□□ -0.32
Sod1P08228 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.06□□□□□ -0.32
Sod1P08228 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sod1P08228 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sod1P08228 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.06□□□□□ -0.32
Sod1P08228 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sod1P08228 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.05□□□□□ -0.32
Sod1P08228 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.05□□□□□ -0.32
Sod1P08228 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Sod1P08228 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sod1P08228 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gm15770-201ENSMUST00000117498 584 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12203-201ENSMUST00000118235 598 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12209-201ENSMUST00000120089 596 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12403-201ENSMUST00000121384 959 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm38144-201ENSMUST00000192790 465 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm18054-201ENSMUST00000207539 555 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.05□□□□□ -0.32
Sod1P08228 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.05□□□□□ -0.32
Sod1P08228 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sod1P08228 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.05□□□□□ -0.32
Sod1P08228 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sod1P08228 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sod1P08228 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.04□□□□□ -0.32
Sod1P08228 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.04□□□□□ -0.32
Sod1P08228 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.04□□□□□ -0.32
Sod1P08228 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.04□□□□□ -0.32
Sod1P08228 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sod1P08228 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Sod1P08228 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.04□□□□□ -0.32
Sod1P08228 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sod1P08228 Gm4271-201ENSMUST00000174444 973 ntBASIC13.04□□□□□ -0.32
Sod1P08228 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.04□□□□□ -0.32
Sod1P08228 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.04□□□□□ -0.32
Sod1P08228 Gm26315-201ENSMUST00000083890 321 ntBASIC13.04□□□□□ -0.32
Sod1P08228 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.04□□□□□ -0.32
Sod1P08228 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.04□□□□□ -0.32
Sod1P08228 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sod1P08228 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sod1P08228 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms