Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col4a1P02463 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Col4a1P02463 Cts7-204ENSMUST00000225321 1257 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
Col4a1P02463 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Gm6447-201ENSMUST00000118905 835 ntBASIC16.89■□□□□ 0.29
Col4a1P02463 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.89■□□□□ 0.29
Col4a1P02463 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.89■□□□□ 0.29
Col4a1P02463 Gm25927-201ENSMUST00000175058 117 ntBASIC16.89■□□□□ 0.29
Col4a1P02463 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.89■□□□□ 0.29
Col4a1P02463 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.89■□□□□ 0.29
Col4a1P02463 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.89■□□□□ 0.29
Col4a1P02463 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a1P02463 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col4a1P02463 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a1P02463 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Col4a1P02463 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Col4a1P02463 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a1P02463 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col4a1P02463 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col4a1P02463 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Gm16479-201ENSMUST00000121706 932 ntBASIC16.88■□□□□ 0.29
Col4a1P02463 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.88■□□□□ 0.29
Col4a1P02463 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col4a1P02463 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col4a1P02463 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.88■□□□□ 0.29
Col4a1P02463 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col4a1P02463 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col4a1P02463 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col4a1P02463 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a1P02463 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.87■□□□□ 0.29
Col4a1P02463 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col4a1P02463 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.87■□□□□ 0.29
Col4a1P02463 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm18827-201ENSMUST00000188341 790 ntBASIC16.87■□□□□ 0.29
Col4a1P02463 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.87■□□□□ 0.29
Col4a1P02463 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col4a1P02463 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a1P02463 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms