Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.04□□□□□ -0.48
H3f3cP02301 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
H3f3cP02301 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H3f3cP02301 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H3f3cP02301 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3cP02301 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H3f3cP02301 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
H3f3cP02301 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm15653-201ENSMUST00000119247 907 ntBASIC12.03□□□□□ -0.48
H3f3cP02301 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.03□□□□□ -0.48
H3f3cP02301 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
H3f3cP02301 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm27618-201ENSMUST00000183671 60 ntBASIC12.03□□□□□ -0.48
H3f3cP02301 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.03□□□□□ -0.48
H3f3cP02301 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H3f3cP02301 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.03□□□□□ -0.48
H3f3cP02301 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
H3f3cP02301 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H3f3cP02301 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3cP02301 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
H3f3cP02301 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
H3f3cP02301 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
H3f3cP02301 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H3f3cP02301 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.02□□□□□ -0.48
H3f3cP02301 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H3f3cP02301 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.02□□□□□ -0.49
H3f3cP02301 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
H3f3cP02301 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.02□□□□□ -0.49
H3f3cP02301 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
H3f3cP02301 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
H3f3cP02301 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.02□□□□□ -0.49
H3f3cP02301 Mir6956-201ENSMUST00000183598 62 ntBASIC12.02□□□□□ -0.49
H3f3cP02301 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H3f3cP02301 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms