Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.22□□□□□ -0.77
TcraP01849 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
TcraP01849 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
TcraP01849 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
TcraP01849 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
TcraP01849 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.21□□□□□ -0.77
TcraP01849 Gm4535-201ENSMUST00000182274 558 ntBASIC10.21□□□□□ -0.77
TcraP01849 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.21□□□□□ -0.77
TcraP01849 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.21□□□□□ -0.77
TcraP01849 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TcraP01849 Gm10355-201ENSMUST00000097146 517 ntBASIC10.21□□□□□ -0.77
TcraP01849 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.21□□□□□ -0.78
TcraP01849 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.21□□□□□ -0.78
TcraP01849 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.21□□□□□ -0.78
TcraP01849 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
TcraP01849 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
TcraP01849 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
TcraP01849 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.2□□□□□ -0.78
TcraP01849 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms