Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.48□□□□□ -0.41
CcnkO88874 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.48□□□□□ -0.41
CcnkO88874 Gm16026-204ENSMUST00000162652 683 ntBASIC12.48□□□□□ -0.41
CcnkO88874 Gm27525-201ENSMUST00000184465 107 ntBASIC12.48□□□□□ -0.41
CcnkO88874 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CcnkO88874 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CcnkO88874 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CcnkO88874 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.47□□□□□ -0.41
CcnkO88874 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.47□□□□□ -0.41
CcnkO88874 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.47□□□□□ -0.41
CcnkO88874 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.47□□□□□ -0.41
CcnkO88874 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.47□□□□□ -0.41
CcnkO88874 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CcnkO88874 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.47□□□□□ -0.41
CcnkO88874 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcnkO88874 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Gm8749-201ENSMUST00000117737 331 ntBASIC12.46□□□□□ -0.41
CcnkO88874 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.46□□□□□ -0.41
CcnkO88874 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Gm9727-201ENSMUST00000161387 555 ntBASIC12.46□□□□□ -0.41
CcnkO88874 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.46□□□□□ -0.41
CcnkO88874 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Thap2-203ENSMUST00000218989 527 ntBASIC12.46□□□□□ -0.41
CcnkO88874 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.46□□□□□ -0.41
CcnkO88874 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.46□□□□□ -0.41
CcnkO88874 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcnkO88874 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CcnkO88874 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.46□□□□□ -0.41
CcnkO88874 Gm10154-201ENSMUST00000084445 354 ntBASIC12.46□□□□□ -0.41
CcnkO88874 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms