Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.72□□□□□ -0.53
Pfdn2O70591 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn2O70591 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.71□□□□□ -0.53
Pfdn2O70591 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.71□□□□□ -0.53
Pfdn2O70591 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Gm11780-201ENSMUST00000136880 516 ntBASIC11.71□□□□□ -0.53
Pfdn2O70591 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.71□□□□□ -0.53
Pfdn2O70591 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.71□□□□□ -0.53
Pfdn2O70591 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pfdn2O70591 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn2O70591 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Pfdn2O70591 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 Grk6-207ENSMUST00000225925 2769 ntBASIC11.71□□□□□ -0.54
Pfdn2O70591 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn2O70591 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn2O70591 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pfdn2O70591 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pfdn2O70591 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Gm43347-201ENSMUST00000200226 580 ntBASIC11.7□□□□□ -0.54
Pfdn2O70591 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pfdn2O70591 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pfdn2O70591 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.69□□□□□ -0.54
Pfdn2O70591 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pfdn2O70591 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pfdn2O70591 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms