Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubr1O70481 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.83■□□□□ 0.44
Ubr1O70481 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ubr1O70481 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.83■□□□□ 0.44
Ubr1O70481 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.83■□□□□ 0.44
Ubr1O70481 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Ubr1O70481 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ubr1O70481 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ubr1O70481 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.82■□□□□ 0.44
Ubr1O70481 Gm13786-201ENSMUST00000122371 333 ntBASIC17.82■□□□□ 0.44
Ubr1O70481 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.82■□□□□ 0.44
Ubr1O70481 Gm28693-202ENSMUST00000190758 331 ntBASIC17.82■□□□□ 0.44
Ubr1O70481 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubr1O70481 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubr1O70481 Gm7584-201ENSMUST00000175829 940 ntBASIC17.81■□□□□ 0.44
Ubr1O70481 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubr1O70481 Gm38241-201ENSMUST00000192641 898 ntBASIC17.81■□□□□ 0.44
Ubr1O70481 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.81■□□□□ 0.44
Ubr1O70481 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.81■□□□□ 0.44
Ubr1O70481 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ubr1O70481 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubr1O70481 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubr1O70481 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.81■□□□□ 0.44
Ubr1O70481 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ubr1O70481 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ubr1O70481 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ubr1O70481 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ubr1O70481 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Ubr1O70481 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ubr1O70481 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.81■□□□□ 0.44
Ubr1O70481 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubr1O70481 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.8■□□□□ 0.44
Ubr1O70481 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ubr1O70481 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ubr1O70481 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ubr1O70481 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm3890-201ENSMUST00000182416 207 ntBASIC17.8■□□□□ 0.44
Ubr1O70481 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm3961-201ENSMUST00000204425 994 ntBASIC17.8■□□□□ 0.44
Ubr1O70481 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm10268-201ENSMUST00000085340 555 ntBASIC17.8■□□□□ 0.44
Ubr1O70481 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.8■□□□□ 0.44
Ubr1O70481 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubr1O70481 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubr1O70481 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ubr1O70481 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ubr1O70481 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ubr1O70481 Gm12363-201ENSMUST00000122250 668 ntBASIC17.79■□□□□ 0.44
Ubr1O70481 Gm26083-201ENSMUST00000157904 193 ntBASIC17.79■□□□□ 0.44
Ubr1O70481 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubr1O70481 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubr1O70481 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.79■□□□□ 0.44
Ubr1O70481 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms