Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Gm25925-201ENSMUST00000158314 306 ntBASIC17.03■□□□□ 0.32
Mmp8O70138 Gm16215-201ENSMUST00000161990 637 ntBASIC17.03■□□□□ 0.32
Mmp8O70138 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp8O70138 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Mmp8O70138 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp8O70138 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Gm24420-201ENSMUST00000176676 59 ntBASIC17.02■□□□□ 0.32
Mmp8O70138 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.02■□□□□ 0.32
Mmp8O70138 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp8O70138 Gm9797-201ENSMUST00000052902 613 ntBASIC17.02■□□□□ 0.32
Mmp8O70138 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Mmp8O70138 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp8O70138 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp8O70138 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.01■□□□□ 0.31
Mmp8O70138 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.01■□□□□ 0.31
Mmp8O70138 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.01■□□□□ 0.31
Mmp8O70138 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.01■□□□□ 0.31
Mmp8O70138 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp8O70138 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
Mmp8O70138 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp8O70138 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp8O70138 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Mmp8O70138 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mmp8O70138 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Gm3365-201ENSMUST00000216296 1480 ntBASIC17■□□□□ 0.31
Mmp8O70138 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp8O70138 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17■□□□□ 0.31
Mmp8O70138 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mmp8O70138 Gm18905-201ENSMUST00000205454 928 ntBASIC17■□□□□ 0.31
Mmp8O70138 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mmp8O70138 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mmp8O70138 Gm17795-201ENSMUST00000214505 757 ntBASIC17■□□□□ 0.31
Mmp8O70138 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17■□□□□ 0.31
Mmp8O70138 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17■□□□□ 0.31
Mmp8O70138 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp8O70138 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms