Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trdmt1O55055 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trdmt1O55055 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.33■□□□□ 0.05
Trdmt1O55055 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trdmt1O55055 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trdmt1O55055 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.33■□□□□ 0.05
Trdmt1O55055 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trdmt1O55055 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trdmt1O55055 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trdmt1O55055 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trdmt1O55055 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.33■□□□□ 0.04
Trdmt1O55055 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
Trdmt1O55055 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trdmt1O55055 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.33■□□□□ 0.04
Trdmt1O55055 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Trdmt1O55055 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdmt1O55055 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm5187-201ENSMUST00000117317 991 ntBASIC15.32■□□□□ 0.04
Trdmt1O55055 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.32■□□□□ 0.04
Trdmt1O55055 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.32■□□□□ 0.04
Trdmt1O55055 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.32■□□□□ 0.04
Trdmt1O55055 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm8810-201ENSMUST00000172895 754 ntBASIC15.32■□□□□ 0.04
Trdmt1O55055 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Proscos-202ENSMUST00000178990 666 ntBASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm27514-201ENSMUST00000183692 110 ntBASIC15.32■□□□□ 0.04
Trdmt1O55055 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trdmt1O55055 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdmt1O55055 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Mir1247-201ENSMUST00000116706 82 ntBASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm15198-201ENSMUST00000117283 177 ntBASIC15.31■□□□□ 0.04
Trdmt1O55055 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm5370-201ENSMUST00000187187 574 ntBASIC15.31■□□□□ 0.04
Trdmt1O55055 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.31■□□□□ 0.04
Trdmt1O55055 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.31■□□□□ 0.04
Trdmt1O55055 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdmt1O55055 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms