Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.69□□□□□ -0.38
Rnf13O54965 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gm7461-201ENSMUST00000058918 827 ntBASIC12.69□□□□□ -0.38
Rnf13O54965 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Rnf13O54965 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf13O54965 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.69□□□□□ -0.38
Rnf13O54965 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Rnf13O54965 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.69□□□□□ -0.38
Rnf13O54965 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf13O54965 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm14140-201ENSMUST00000119999 995 ntBASIC12.68□□□□□ -0.38
Rnf13O54965 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.68□□□□□ -0.38
Rnf13O54965 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.68□□□□□ -0.38
Rnf13O54965 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.68□□□□□ -0.38
Rnf13O54965 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.68□□□□□ -0.38
Rnf13O54965 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf13O54965 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.68□□□□□ -0.38
Rnf13O54965 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf13O54965 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.68□□□□□ -0.38
Rnf13O54965 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf13O54965 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rnf13O54965 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf13O54965 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf13O54965 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf13O54965 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf13O54965 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rnf13O54965 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Rnf13O54965 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf13O54965 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.67□□□□□ -0.38
Rnf13O54965 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf13O54965 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf13O54965 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf13O54965 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf13O54965 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf13O54965 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf13O54965 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.66□□□□□ -0.38
Rnf13O54965 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf13O54965 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf13O54965 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms